Assoc. Prof. Bilal Ersen KERMAN

Publication Network

Journal articles indexed in SCI, SSCI, and AHCI

Combined segmentation and classificationbased approach to automated analysis of biomedical signals obtained from calcium imaging

Dursun G., Bijelić D., AYŞİT N., Vatandaşlar B. K., Radenović L., Çapar A., et al.

PLoS ONE , vol.18, no.2 February, 2023 (SCI-Expanded)

Two phases of macrophages: Inducing maturation and death of oligodendrocytes in vitro co-culture

Aydınlı F. İ., Er S., KERMAN B. E.

Journal of Neuroscience Methods , vol.382, 2022 (SCI-Expanded)

Multiple Sclerosis Biomarker Candidates Revealed by Cell-Type-Specific Interactome Analysis

Yurduseven K., Babal Y. K., Celik E., KERMAN B. E., Kurnaz I. A.

OMICS A Journal of Integrative Biology , vol.26, no.5, pp.305-317, 2022 (SCI-Expanded)

Myelin detection in fluorescence microscopy images using machine learning

ÇİMEN S., Çapar A., Ekinci D. A., AYTEN U. E., KERMAN B. E., Töreyin B. U.

Journal of Neuroscience Methods , vol.346, 2020 (SCI-Expanded)

Motoneuron expression profiling identifies an association between an axonal splice variant of HDGF-related protein 3 and peripheral myelination

KERMAN B. E., Genoud S., Vatandaslar B. K., Denli A. M., Ghosh S. G., Xu X., et al.

Journal of Biological Chemistry , vol.295, no.34, pp.12233-12246, 2020 (SCI-Expanded)

Species-specific maturation profiles of human, chimpanzee and bonobo neural cells

Marchetto M. C., Hrvoj-Mihic B., KERMAN B. E., Yu D. X., Vadodaria K. C., Linker S. B., et al.

eLife , vol.8, 2019 (SCI-Expanded) Sustainable Development

Science-inspired sustainable behavior

Kumar B., Jensen M. M., Strielkowski W., Johnston J. T., Sharma V., Dandara C., et al.

Science , vol.364, no.6443, pp.822-824, 2019 (SCI-Expanded)

Particular phosphorylation of PI3K/Akt on Thr308 via PDK-1 and PTEN mediates melatonin's neuroprotective activity after focal cerebral ischemia in mice

Kilic U., ÇAĞLAYAN A. B., BEKER M. Ç., Gunal M. Y., ÇAĞLAYAN B., YALÇIN E., et al.

Redox Biology , vol.12, pp.657-665, 2017 (SCI-Expanded)

Myelin disorders and stem cells: As therapies and models

Aydinli F. İ., Çelik E., Vatandaşlar B. K., KERMAN B. E.

Turkish Journal of Biology , vol.40, no.5, pp.1068-1080, 2016 (SCI-Expanded)

Articles Published in Other Journals

Identification of protein-protein interaction bridges for multiple sclerosis

Yazici G., Kurt Vatandaslar B., Aydin Canturk I., Aydinli F. I., ARICI DÜZ Ö., Karakoc E., et al.

Bioinformatics , vol.39, no.4, 2023 (Scopus)

A multi-spectral myelin annotation tool for machine learning based myelin quantification [version 1; peer review: 1 not approved]

Çapar A., ÇİMEN S., Aladağ Z., Ekinci D. A., AYTEN U. E., KERMAN B. E., et al.

F1000Research , vol.9, pp.1-10, 2021 (Scopus)

Papers Presented at Peer-Reviewed Scientific Conferences

Myelin segmentation in fluorescence microscopy images Floresan mikroskop görüntülerinde miyelin segmentasyonu

ÇİMEN S., Ekinci D. A., Cakir E., Ekşioğlu E. M., AYTEN U. E., Çapar A., et al.

2019 Medical Technologies Congress, TIPTEKNO 2019, İzmir, Turkey, 3 - 05 October 2019, (Full Text)

DEVELOPMENT OF AUTOMATED ANALYSIS OF BIOMEDICALSIGNALS OBTAINED FROM CALCIUM IMAGING

DURSUN G., ÇAPAR A., ÖZKAYA U., KERMAN B. E., Korenic A., Dunja B., et al.

JOINT 12th EBSA congress10th ICBP – IUPAP congress, 20 - 24 July 2019, (Summary Text)

Development of automated analysis of biomedical signals such as calcium imaging

ÇAPAR A., ÖZKAYA U., DURSUN G., Korenic A., Dunja B., Milicevic K., et al.

FENS Regional Meeting Belgrade Serbia, 10 - 13 July 2019, (Summary Text)

TIME LAPSE IGG-INDUCED CALCIUM SIGNALING ANALYSIS FOR ALS DIAGNOSIS

ÇAPAR A., DURSUN G., KERMAN B. E., Korenic A., Dunja B., Radenovic L., et al.

FENS Regional Meeting Belgrade, 10 - 13 July 2019, (Summary Text)

Refractive index tomography of myelinating glial cells

Toy M. F., Vatandaslar B. K., Kerman B. E.

Quantitative Phase Imaging V 2019, California, United States Of America, 2 - 05 February 2019, vol.10887, (Full Text)

DeepMQ: A deep learning approach based myelin quantification in microscopic fluorescence images

ÇİMEN S., Çapar A., Ekinci D. A., KERMAN B. E., AYTEN U. E., Töreyin B. U.

26th European Signal Processing Conference, EUSIPCO 2018, Rome, Italy, 3 - 07 September 2018, vol.2018-September, pp.61-65, (Full Text)

Automated Myelin Quantification From Cem to DeepMQ

ÇİMEN S., ÇAPAR A., Ekinci D. A., AYTEN U. E., TÖREYİN B. U., KERMAN B. E.

Neubias The Bioimage Analysis Community Conference, Szeged, Hungary, 31 January - 02 February 2018, pp.121, (Summary Text)

Kök Hücre Kullanımıyla Miyelin Oluşumunu ve Miyelinizasyon Hastalıklarını Modelleme

KERMAN B. E.

XIII. İÜGEN Kış Okulu, İstanbul, Turkey, 4 - 06 March 2016

Modeling myelin formation and myelination disorders using stem cells

KERMAN B. E.

MolBiyoKon2015, 27 - 29 November 2015

A novel embryonic stem cell based myelination assay

KERMAN B. E., Kim H. J., Mei A., Padmanabhan K., Georges S., Joens M. S., et al.

Society for Neuroscience Annual Meeting – CDRF Hot Topics in Stem Cell Biology, San Diego, United States Of America, 9 - 13 November 2013

Development of an embryonic stem cell based myelination assay

KERMAN B. E., Mei A., Kim H. J., Gage F. H.

Society for Neuroscience Annual Meeting, Washington, Kiribati, 12 - 16 November 2011

Transcriptional Control of Apical Mechanics During Tube Morphogenesis

KERMAN B. E., Cheshire A. M., Zipfel W. R., Myatt M. M., Spector A. A., Andrew D. J.

The American Society for Cell Biology 47th Annual Meeting, Washington, Kiribati, 1 - 05 December 2007

High Resolution Live Imaging of Deep Tissue Organogenesisin the Drosophila Embryo

Cheshire A. M., KERMAN B. E., Andrew D. J.

47th Annual Drosophila Research Conference, Houston, United States Of America, 29 March - 01 May 2006

Analysis of dalmatian suggests a role for the Nervous System in Drosophila Embryonic Trachea and Salivary Duct Development

KERMAN B. E., Andrew D. J.

47th Annual Drosophila Research Conference, Houston, United States Of America, 29 March - 02 April 2006

Publications & Works